STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_2007Putative secreted protein; Septum formation initiator. (193 aa)    
Predicted Functional Partners:
ftsQ
Cell division protein; Essential cell division protein.
   
 
 0.898
CVAR_2005
Hypothetical protein; Exopolyphosphatase.
 
  
 0.840
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
    0.827
rodA
Bacterial cell division membrane protein; Belongs to the SEDS family.
   
 
 0.749
ftsW
Bacterial cell division membrane protein; Belongs to the SEDS family.
   
 
 0.749
CVAR_2006
Hypothetical protein.
     
 0.738
mntR
Mn-dependent transcriptional regulator.
  
    0.661
CVAR_2009
Putative secreted protein; Membrane-bound lytic murein transglycosylase B.
       0.621
CVAR_0063
Cell division protein FtsI/penicillin-binding protein 2.
  
 
 0.582
ftsI
Cell division protein FtsI/penicillin-binding protein 2.
  
 
 0.582
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.