STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mntAABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family. (298 aa)    
Predicted Functional Partners:
mntC
ABC-type Mn2+/Zn2+ transport systems, permease components.
 
 0.997
mntB
ABC-type sugar transport systems, ATPase components.
 
 
 0.994
CVAR_0668
Putative membrane protein; ABC-type Mn2+/Zn2+ transport systems, permease components.
  
 0.912
ciuD
ABC-type sugar transport systems, ATPase components.
 
  
 0.862
CVAR_0521
ABC-type Mn2+/Zn2+ transport systems, permease components.
 
  
 0.827
CVAR_0522
ABC-type sugar transport systems, ATPase components.
 
  
 0.738
mntR
Mn-dependent transcriptional regulator.
  
  
 0.667
CVAR_0269
Zinc metallochaperone; Putative GTPases (G3E family).
  
  
 0.638
CVAR_2009
Putative secreted protein; Membrane-bound lytic murein transglycosylase B.
       0.559
rpmB
Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.505
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.