STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_2278Putative secreted protein. (222 aa)    
Predicted Functional Partners:
CVAR_1069
Putative secreted protein; ATPase involved in DNA repair.
  
     0.605
CVAR_1832
Putative membrane protein.
  
     0.586
CVAR_0714
Putative secreted protein.
  
     0.563
CVAR_1451
Hypothetical protein.
  
     0.527
metN
Methionine ABC transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
       0.491
metI
ABC-type metal ion transport system, permease component.
       0.491
metQ
ABC-type metal ion transport system, periplasmic component/surface antigen.
       0.473
CVAR_0096
Putative membrane protein; ABC-type antimicrobial peptide transport system, permease component.
  
     0.463
CVAR_0281
Putative secreted protein; Large exoproteins involved in heme utilization or adhesion.
 
   
 0.460
CVAR_2351
Molybdopterin-guanine dinucleotide biosynthesis protein A.
  
     0.456
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.