STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_2321Hypothetical protein. (389 aa)    
Predicted Functional Partners:
CVAR_2306
Hypothetical protein; DNA segregation ATPase FtsK/SpoIIIE and related proteins.
 
 
 0.891
pks13
Polyketide synthase modules and related proteins.
 
 
 0.842
CVAR_2318
Hypothetical protein; DNA segregation ATPase FtsK/SpoIIIE and related proteins.
 
 
 0.824
CVAR_1083
Putative acyl carrier protein; Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.782
elrF
Envelope lipids regulation factor.
 
 
 0.756
CVAR_3019
Putative secreted protein; Phage-related protein, tail component.
  
 
 
 0.734
sepP
Putative serine proteinase precursor; Subtilisin-like serine proteases.
  
 
 0.727
CVAR_2112
Putative secreted protein.
  
   
 0.718
CVAR_2770
Putative secreted protein; Predicted esterase.
  
     0.706
CVAR_1089
Hypothetical protein.
  
     0.705
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.