STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lip4Triacylglycerol lipase; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold. (329 aa)    
Predicted Functional Partners:
rplL
50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
  
   0.676
lip2
Triacylglycerol lipase.
  
     0.651
CVAR_0540
Hypothetical protein; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold.
  
  
 0.641
CVAR_1528
Hypothetical protein; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase.
      
 0.627
lipA3
Triacylglycerol lipase precursor; Dipeptidyl aminopeptidases/acylaminoacyl- peptidases.
  
     0.618
lip1
Triacylglycerol lipase.
  
     0.584
lip5
Triacylglycerol lipase.
  
     0.568
rplJ
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.
  
    0.564
CVAR_0396
Putative secreted protein.
  
     0.547
rpsP
Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
  
 
   0.528
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.