STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_2463Flp pilus assembly protein TadC. (317 aa)    
Predicted Functional Partners:
CVAR_2464
Flp pilus assembly protein, ATPase CpaF.
  
  
 0.923
CVAR_2462
Hypothetical protein.
 
   
 0.825
CVAR_2465
Hypothetical protein.
       0.559
CVAR_1120
Hypothetical protein.
  
     0.557
CVAR_2461
Putative secreted protein.
       0.554
CVAR_2466
Hypothetical protein; Phosphoserine phosphatase.
       0.548
CVAR_2460
Hypothetical protein.
       0.533
CVAR_1150
Hypothetical protein; Acetyltransferases.
  
     0.497
CVAR_2321
Hypothetical protein.
  
    0.493
tadA
Hypothetical protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
      
 0.487
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.