STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_2570Hypothetical protein; FAD/FMN-containing dehydrogenases. (506 aa)    
Predicted Functional Partners:
cma
Cyclopropane fatty acid synthase and related methyltransferases.
 
    0.912
CVAR_0297
Putative membrane protein.
  
     0.696
CVAR_0289
Hypothetical protein; SAM-dependent methyltransferases.
 
   0.641
aftD
Arabinofuranosyltransferase D.
 
     0.609
pks13
Polyketide synthase modules and related proteins.
 
 
 0.545
qcrC
Cytochrome c, mono- and diheme variants.
   
 
 0.545
CVAR_2409
Putative secreted protein.
  
     0.491
CVAR_2750
Hypothetical protein.
  
     0.477
etfA
Electron transfer flavoprotein, alpha subunit.
  
 
 0.460
etfB
Electron transfer flavoprotein, beta subunit.
  
 
 0.459
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.