STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_2737Hypothetical protein; ABC-type spermidine/putrescine transport systems, ATPase components. (251 aa)    
Predicted Functional Partners:
CVAR_2736
Predicted membrane protein.
 
     0.923
CVAR_0185
ABC-type multidrug transport system, ATPase and permease components.
 
  
 0.746
cydB
Cytochrome bd-type quinol oxidase, subunit 2.
  
  
 0.699
hemB
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
       0.637
cydA
Cytochrome bd-type quinol oxidase, subunit 1.
  
  
 0.595
CVAR_2733
Putative membrane protein.
       0.595
CVAR_2734
Putative membrane protein.
       0.595
CVAR_2732
Putative membrane protein; Cation transport ATPase.
       0.592
CVAR_2772
Putative membrane protein.
  
     0.548
hemL
Glutamate-1-semialdehyde aminotransferase.
       0.535
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.