STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_2750Hypothetical protein. (200 aa)    
Predicted Functional Partners:
mshA
MshA glycosyltransferase; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.
 
     0.784
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
       0.675
CVAR_2778
Hypothetical protein.
  
     0.661
CVAR_0625
Putative membrane protein; Permeases of the major facilitator superfamily.
  
     0.608
gpmA
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.588
CVAR_0575
Hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands.
  
   
 0.584
CVAR_0745
Uncharacterized protein conserved in bacteria.
 
     0.580
CVAR_2748
Two-component system sensor kinase; Signal transduction histidine kinase.
       0.580
CVAR_2151
Hypothetical protein.
  
     0.573
CVAR_2747
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.548
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.