STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_2853ABC-type multidrug transport system, ATPase and permease components. (587 aa)    
Predicted Functional Partners:
potA
ABC transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
   
0.853
CVAR_2852
ABC transport system permease protein / ATP-binding protein.
   
0.850
CVAR_0229
Putative membrane protein; ABC-type multidrug transport system, ATPase and permease components.
    0.784
CVAR_0449
Putative membrane protein; ABC-type multidrug transport system, ATPase and permease components.
    0.784
metN
Methionine ABC transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
      0.641
gluA
ABC-type polar amino acid transport system, ATPase component.
    
0.572
CVAR_2851
Putative membrane protein; Permeases of the major facilitator superfamily.
       0.543
pks13
Polyketide synthase modules and related proteins.
  
 
 0.518
CVAR_1357
Hypothetical protein; ABC-type sugar transport systems, ATPase components.
  
  0.514
dnaK
Molecular chaperone; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.492
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.