STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gntPH+/gluconate symporter and related permeases. (464 aa)    
Predicted Functional Partners:
gntK
Gluconokinase; Gluconate kinase.
 
  
 0.897
CVAR_2949
Putative carbohydrate kinase; ABC-type sugar transport systems, ATPase components.
 
  
 0.819
ppsA
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
   
    0.687
glxK
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
 
  
 0.592
ptsF
Phosphotransferase system, fructose-specific IIC component.
     
 0.560
CVAR_0583
Putative carbohydrate kinase; Gluconate kinase.
 
  
 0.550
mctC
Monocarboxylic acid transporter; Predicted symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
   
  
 0.491
ptsG
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
      
 0.474
xylB
Xylulokinase; Glycerol kinase.
  
  
 0.447
CVAR_2948
Permeases of the major facilitator superfamily.
       0.442
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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