STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H6BUG4_EXODNAlanine-glyoxylate transaminase. (542 aa)    
Predicted Functional Partners:
H6BQM1_EXODN
TPR_REGION domain-containing protein.
    
 0.953
H6BVJ2_EXODN
2,2-dialkylglycine decarboxylase (Pyruvate); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.940
H6BTJ7_EXODN
Alanine transaminase.
  
 0.923
H6BMB5_EXODN
Aminomethyltransferase.
  
 
 0.911
H6C0Z9_EXODN
Malate synthase; Belongs to the malate synthase family.
  
 
 0.911
H6C402_EXODN
Tryptophan synthase.
  
 
 0.910
H6BVQ7_EXODN
Phosphoserine phosphatase.
   
 0.908
H6BZ31_EXODN
Phosphoserine aminotransferase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
    
 0.908
H6C5C8_EXODN
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.893
H6BY67_EXODN
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.881
Your Current Organism:
Exophiala dermatitidis
NCBI taxonomy Id: 858893
Other names: E. dermatitidis NIH/UT8656, Exophiala dermatitidis NIH 8656, Exophiala dermatitidis NIH/UT8656, Wangiella dermatitidis NIH 8656
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