Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RecJ | RecQ | SAMN02983009_00202 | SAMN02983009_00138 | single-stranded-DNA-specific exonuclease. | ATP-dependent DNA helicase RecQ. | 0.945 |
RecJ | polA | SAMN02983009_00202 | SAMN02983009_01227 | single-stranded-DNA-specific exonuclease. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.467 |
RecJ | recA | SAMN02983009_00202 | SAMN02983009_01311 | single-stranded-DNA-specific exonuclease. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.525 |
RecQ | RecJ | SAMN02983009_00138 | SAMN02983009_00202 | ATP-dependent DNA helicase RecQ. | single-stranded-DNA-specific exonuclease. | 0.945 |
RecQ | SDB02309.1 | SAMN02983009_00138 | SAMN02983009_00049 | ATP-dependent DNA helicase RecQ. | DNA topoisomerase-3. | 0.980 |
RecQ | SDB13599.1 | SAMN02983009_00138 | SAMN02983009_00641 | ATP-dependent DNA helicase RecQ. | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | 0.938 |
RecQ | SDB20504.1 | SAMN02983009_00138 | SAMN02983009_00983 | ATP-dependent DNA helicase RecQ. | Exonuclease SbcC. | 0.850 |
RecQ | SDB20518.1 | SAMN02983009_00138 | SAMN02983009_00984 | ATP-dependent DNA helicase RecQ. | DNA repair exonuclease SbcCD nuclease subunit. | 0.929 |
RecQ | SDB24999.1 | SAMN02983009_00138 | SAMN02983009_01189 | ATP-dependent DNA helicase RecQ. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.905 |
RecQ | SDB33752.1 | SAMN02983009_00138 | SAMN02983009_01619 | ATP-dependent DNA helicase RecQ. | Toprim domain-containing protein. | 0.825 |
RecQ | SDB37442.1 | SAMN02983009_00138 | SAMN02983009_01789 | ATP-dependent DNA helicase RecQ. | ATP-dependent DNA helicase DinG. | 0.853 |
RecQ | polA | SAMN02983009_00138 | SAMN02983009_01227 | ATP-dependent DNA helicase RecQ. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.983 |
RecQ | recA | SAMN02983009_00138 | SAMN02983009_01311 | ATP-dependent DNA helicase RecQ. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.963 |
SDB02309.1 | RecQ | SAMN02983009_00049 | SAMN02983009_00138 | DNA topoisomerase-3. | ATP-dependent DNA helicase RecQ. | 0.980 |
SDB02309.1 | SDB20504.1 | SAMN02983009_00049 | SAMN02983009_00983 | DNA topoisomerase-3. | Exonuclease SbcC. | 0.674 |
SDB02309.1 | SDB20518.1 | SAMN02983009_00049 | SAMN02983009_00984 | DNA topoisomerase-3. | DNA repair exonuclease SbcCD nuclease subunit. | 0.539 |
SDB02309.1 | SDB37442.1 | SAMN02983009_00049 | SAMN02983009_01789 | DNA topoisomerase-3. | ATP-dependent DNA helicase DinG. | 0.513 |
SDB02309.1 | polA | SAMN02983009_00049 | SAMN02983009_01227 | DNA topoisomerase-3. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.678 |
SDB02309.1 | recA | SAMN02983009_00049 | SAMN02983009_01311 | DNA topoisomerase-3. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.632 |
SDB13599.1 | RecQ | SAMN02983009_00641 | SAMN02983009_00138 | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | ATP-dependent DNA helicase RecQ. | 0.938 |
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