Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDB02534.1 | SDB02775.1 | SAMN02983009_00066 | SAMN02983009_00084 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Outer membrane autotransporter barrel domain-containing protein. | 0.498 |
SDB02534.1 | SDB08260.1 | SAMN02983009_00066 | SAMN02983009_00366 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Putative sensory transduction regulator. | 0.742 |
SDB02534.1 | SDB08273.1 | SAMN02983009_00066 | SAMN02983009_00367 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Hypothetical protein. | 0.742 |
SDB02534.1 | SDB28571.1 | SAMN02983009_00066 | SAMN02983009_01380 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Autotransporter-associated beta strand repeat-containing protein. | 0.498 |
SDB02534.1 | SDB30393.1 | SAMN02983009_00066 | SAMN02983009_01467 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Autotransporter-associated beta strand repeat-containing protein. | 0.498 |
SDB02534.1 | SDB38020.1 | SAMN02983009_00066 | SAMN02983009_01821 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Autotransporter beta-domain-containing protein. | 0.763 |
SDB02534.1 | acpP | SAMN02983009_00066 | SAMN02983009_01651 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.998 |
SDB02775.1 | SDB02534.1 | SAMN02983009_00084 | SAMN02983009_00066 | Outer membrane autotransporter barrel domain-containing protein. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.498 |
SDB02775.1 | SDB08260.1 | SAMN02983009_00084 | SAMN02983009_00366 | Outer membrane autotransporter barrel domain-containing protein. | Putative sensory transduction regulator. | 0.410 |
SDB02775.1 | SDB08273.1 | SAMN02983009_00084 | SAMN02983009_00367 | Outer membrane autotransporter barrel domain-containing protein. | Hypothetical protein. | 0.410 |
SDB02775.1 | SDB38020.1 | SAMN02983009_00084 | SAMN02983009_01821 | Outer membrane autotransporter barrel domain-containing protein. | Autotransporter beta-domain-containing protein. | 0.504 |
SDB08260.1 | SDB02534.1 | SAMN02983009_00366 | SAMN02983009_00066 | Putative sensory transduction regulator. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.742 |
SDB08260.1 | SDB02775.1 | SAMN02983009_00366 | SAMN02983009_00084 | Putative sensory transduction regulator. | Outer membrane autotransporter barrel domain-containing protein. | 0.410 |
SDB08260.1 | SDB08273.1 | SAMN02983009_00366 | SAMN02983009_00367 | Putative sensory transduction regulator. | Hypothetical protein. | 0.773 |
SDB08260.1 | SDB08285.1 | SAMN02983009_00366 | SAMN02983009_00368 | Putative sensory transduction regulator. | Hemolysin activation/secretion protein. | 0.743 |
SDB08260.1 | SDB11231.1 | SAMN02983009_00366 | SAMN02983009_00525 | Putative sensory transduction regulator. | Leucine rich repeat-containing protein. | 0.432 |
SDB08260.1 | SDB19125.1 | SAMN02983009_00366 | SAMN02983009_00909 | Putative sensory transduction regulator. | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. | 0.432 |
SDB08260.1 | SDB28571.1 | SAMN02983009_00366 | SAMN02983009_01380 | Putative sensory transduction regulator. | Autotransporter-associated beta strand repeat-containing protein. | 0.410 |
SDB08260.1 | SDB30393.1 | SAMN02983009_00366 | SAMN02983009_01467 | Putative sensory transduction regulator. | Autotransporter-associated beta strand repeat-containing protein. | 0.410 |
SDB08260.1 | SDB38020.1 | SAMN02983009_00366 | SAMN02983009_01821 | Putative sensory transduction regulator. | Autotransporter beta-domain-containing protein. | 0.522 |
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