Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NifJ | SDB03217.1 | SAMN02983009_00469 | SAMN02983009_00115 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | butyryl-CoA dehydrogenase. | 0.898 |
NifJ | SDB08678.1 | SAMN02983009_00469 | SAMN02983009_00400 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.450 |
NifJ | SDB09329.1 | SAMN02983009_00469 | SAMN02983009_00417 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.450 |
NifJ | SDB13261.1 | SAMN02983009_00469 | SAMN02983009_00621 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein. | 0.999 |
NifJ | SDB13485.1 | SAMN02983009_00469 | SAMN02983009_00634 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Electron transfer flavoprotein beta subunit. | 0.664 |
NifJ | SDB13504.1 | SAMN02983009_00469 | SAMN02983009_00635 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.450 |
NifJ | SDB18654.1 | SAMN02983009_00469 | SAMN02983009_00895 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.450 |
NifJ | SDB27947.1 | SAMN02983009_00469 | SAMN02983009_01354 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Hypothetical protein. | 0.690 |
NifJ | SDB40598.1 | SAMN02983009_00469 | SAMN02983009_01954 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Electron transfer flavoprotein beta subunit. | 0.664 |
NifJ | SDB40614.1 | SAMN02983009_00469 | SAMN02983009_01955 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.450 |
SDB03217.1 | NifJ | SAMN02983009_00115 | SAMN02983009_00469 | butyryl-CoA dehydrogenase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.898 |
SDB03217.1 | SDB08678.1 | SAMN02983009_00115 | SAMN02983009_00400 | butyryl-CoA dehydrogenase. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.523 |
SDB03217.1 | SDB09329.1 | SAMN02983009_00115 | SAMN02983009_00417 | butyryl-CoA dehydrogenase. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.528 |
SDB03217.1 | SDB13261.1 | SAMN02983009_00115 | SAMN02983009_00621 | butyryl-CoA dehydrogenase. | NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein. | 0.910 |
SDB03217.1 | SDB13485.1 | SAMN02983009_00115 | SAMN02983009_00634 | butyryl-CoA dehydrogenase. | Electron transfer flavoprotein beta subunit. | 0.979 |
SDB03217.1 | SDB13504.1 | SAMN02983009_00115 | SAMN02983009_00635 | butyryl-CoA dehydrogenase. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.503 |
SDB03217.1 | SDB18654.1 | SAMN02983009_00115 | SAMN02983009_00895 | butyryl-CoA dehydrogenase. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.503 |
SDB03217.1 | SDB27947.1 | SAMN02983009_00115 | SAMN02983009_01354 | butyryl-CoA dehydrogenase. | Hypothetical protein. | 0.812 |
SDB03217.1 | SDB40598.1 | SAMN02983009_00115 | SAMN02983009_01954 | butyryl-CoA dehydrogenase. | Electron transfer flavoprotein beta subunit. | 0.979 |
SDB03217.1 | SDB40614.1 | SAMN02983009_00115 | SAMN02983009_01955 | butyryl-CoA dehydrogenase. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.526 |
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