STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB18569.1Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. (300 aa)    
Predicted Functional Partners:
CitD
Citrate lyase subunit gamma (acyl carrier protein); Covalent carrier of the coenzyme of citrate lyase.
 
  
 0.994
CitF
Citrate lyase subunit alpha / citrate CoA-transferase.
 
  
 0.994
SDB18622.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family.
 
  
 0.842
SDB18548.1
Oxaloacetate decarboxylase, beta subunit.
  
  
 0.767
SDB18506.1
Na+/citrate or Na+/malate symporter.
 
   
 0.759
SDB18538.1
Biotin-requiring enzyme.
  
  
 0.749
SDB18518.1
Oxaloacetate decarboxylase, alpha subunit.
  
  
 0.745
SDB18528.1
Oxaloacetate decarboxylase, gamma chain.
       0.691
SDB06092.1
L-fuculose-phosphate aldolase.
   
    0.672
SDB16201.1
L-fuculose-phosphate aldolase.
   
    0.672
Your Current Organism:
Fusobacterium necrophorum
NCBI taxonomy Id: 859
Other names: ATCC 25286, Acinomyces pseudonecrophorus, Actinomyces necrophorus, Bacillus necrophorus, Bacillus necroseos, Bacillus necrosus, Bacterium necrophorum, Bacteroides necrophorus, CCUG 9994, CIP 104559, Corynebacterium necrophorum, DSM 21784, F. necrophorum, Fusibacterium necrophorum, Fusiformis hemolyticus, Fusiformis necrophorus, JCM 3718, NCTC 13726, Necrobacterium necrophorus, Proactinomyces necrophorus, Sphaerophorus necrophorus, Sphaerophorus pseudonecrophorus, Streptothrix necrophorus, Streptothrix necuphtora, VPI 2891
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