STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MurIGlutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. (261 aa)    
Predicted Functional Partners:
MurD
UDP-N-acetylmuramoylalanine--D-glutamate ligase.
 
  
 0.965
GlsA
L-glutaminase; Belongs to the glutaminase family.
     
 0.923
SDB17029.1
Glutamate dehydrogenase (NAD(P)+).
  
 
 0.913
SDB24344.1
Glyoxylase, beta-lactamase superfamily II.
     
 0.746
SDB09782.1
asparaginyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
     
 0.721
SDB04116.1
XTP/dITP diphosphohydrolase; Belongs to the HAM1 NTPase family.
 
    0.710
MurA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
 
   
 0.709
SDB15204.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
     
 0.700
SDB41842.1
Glucose-1-phosphate thymidylyltransferase.
      
 0.678
SDB48042.1
Glucose-1-phosphate thymidylyltransferase.
      
 0.678
Your Current Organism:
Fusobacterium necrophorum
NCBI taxonomy Id: 859
Other names: ATCC 25286, Acinomyces pseudonecrophorus, Actinomyces necrophorus, Bacillus necrophorus, Bacillus necroseos, Bacillus necrosus, Bacterium necrophorum, Bacteroides necrophorus, CCUG 9994, CIP 104559, Corynebacterium necrophorum, DSM 21784, F. necrophorum, Fusibacterium necrophorum, Fusiformis hemolyticus, Fusiformis necrophorus, JCM 3718, NCTC 13726, Necrobacterium necrophorus, Proactinomyces necrophorus, Sphaerophorus necrophorus, Sphaerophorus pseudonecrophorus, Streptothrix necrophorus, Streptothrix necuphtora, VPI 2891
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