STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB27803.1TRAP transporter, DctM subunit. (428 aa)    
Predicted Functional Partners:
SDB42596.1
Tripartite ATP-independent transporter solute receptor, DctP family.
  
 0.952
SDB27813.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 
 0.945
SDB27825.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
  
 0.943
SDB18415.1
Tripartite ATP-independent transporter solute receptor, DctP family.
  
 0.798
SDB25238.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
  
 0.798
SDB25225.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 
 0.749
SDB18424.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 
 0.740
SDB27791.1
Sugar phosphate isomerase/epimerase.
       0.739
SDB27836.1
Transcriptional regulator, LacI family.
       0.637
SDB42608.1
TRAP transporter, DctM subunit.
 
 
0.493
Your Current Organism:
Fusobacterium necrophorum
NCBI taxonomy Id: 859
Other names: ATCC 25286, Acinomyces pseudonecrophorus, Actinomyces necrophorus, Bacillus necrophorus, Bacillus necroseos, Bacillus necrosus, Bacterium necrophorum, Bacteroides necrophorus, CCUG 9994, CIP 104559, Corynebacterium necrophorum, DSM 21784, F. necrophorum, Fusibacterium necrophorum, Fusiformis hemolyticus, Fusiformis necrophorus, JCM 3718, NCTC 13726, Necrobacterium necrophorus, Proactinomyces necrophorus, Sphaerophorus necrophorus, Sphaerophorus pseudonecrophorus, Streptothrix necrophorus, Streptothrix necuphtora, VPI 2891
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.