Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ObgE | RlmB | SAMN02983009_00020 | SAMN02983009_01306 | GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.605 |
| ObgE | SDB02534.1 | SAMN02983009_00020 | SAMN02983009_00066 | GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.450 |
| ObgE | SDB28972.1 | SAMN02983009_00020 | SAMN02983009_01405 | GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 23S rRNA pseudouridine1911/1915/1917 synthase. | 0.745 |
| ObgE | mnmE | SAMN02983009_00020 | SAMN02983009_01125 | GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | tRNA modification GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.451 |
| RlmB | ObgE | SAMN02983009_01306 | SAMN02983009_00020 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.605 |
| RlmB | SDB02534.1 | SAMN02983009_01306 | SAMN02983009_00066 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.651 |
| RlmB | SDB28972.1 | SAMN02983009_01306 | SAMN02983009_01405 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 23S rRNA pseudouridine1911/1915/1917 synthase. | 0.706 |
| RlmB | mnmE | SAMN02983009_01306 | SAMN02983009_01125 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | tRNA modification GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.703 |
| SDB02534.1 | ObgE | SAMN02983009_00066 | SAMN02983009_00020 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.450 |
| SDB02534.1 | RlmB | SAMN02983009_00066 | SAMN02983009_01306 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.651 |
| SDB02534.1 | SDB16046.1 | SAMN02983009_00066 | SAMN02983009_00742 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | RNA methyltransferase, TrmH family. | 0.651 |
| SDB02534.1 | SDB28972.1 | SAMN02983009_00066 | SAMN02983009_01405 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 23S rRNA pseudouridine1911/1915/1917 synthase. | 0.692 |
| SDB02534.1 | mnmE | SAMN02983009_00066 | SAMN02983009_01125 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | tRNA modification GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.692 |
| SDB02534.1 | thiE | SAMN02983009_00066 | SAMN02983009_01374 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.446 |
| SDB16046.1 | SDB02534.1 | SAMN02983009_00742 | SAMN02983009_00066 | RNA methyltransferase, TrmH family. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.651 |
| SDB16046.1 | SDB28972.1 | SAMN02983009_00742 | SAMN02983009_01405 | RNA methyltransferase, TrmH family. | 23S rRNA pseudouridine1911/1915/1917 synthase. | 0.642 |
| SDB16046.1 | mnmE | SAMN02983009_00742 | SAMN02983009_01125 | RNA methyltransferase, TrmH family. | tRNA modification GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.700 |
| SDB28972.1 | ObgE | SAMN02983009_01405 | SAMN02983009_00020 | 23S rRNA pseudouridine1911/1915/1917 synthase. | GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.745 |
| SDB28972.1 | RlmB | SAMN02983009_01405 | SAMN02983009_01306 | 23S rRNA pseudouridine1911/1915/1917 synthase. | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.706 |
| SDB28972.1 | SDB02534.1 | SAMN02983009_01405 | SAMN02983009_00066 | 23S rRNA pseudouridine1911/1915/1917 synthase. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.692 |
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