Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CobA | HemB | SAMN02983009_01411 | SAMN02983009_01413 | Uroporphyrinogen III methyltransferase / synthase. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.996 |
CobA | HemC | SAMN02983009_01411 | SAMN02983009_01407 | Uroporphyrinogen III methyltransferase / synthase. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.999 |
CobA | HemL | SAMN02983009_01411 | SAMN02983009_01414 | Uroporphyrinogen III methyltransferase / synthase. | Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.910 |
CobA | SDB02534.1 | SAMN02983009_01411 | SAMN02983009_00066 | Uroporphyrinogen III methyltransferase / synthase. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.594 |
CobA | SDB29015.1 | SAMN02983009_01411 | SAMN02983009_01408 | Uroporphyrinogen III methyltransferase / synthase. | Hypothetical protein. | 0.548 |
CobA | SDB29030.1 | SAMN02983009_01411 | SAMN02983009_01409 | Uroporphyrinogen III methyltransferase / synthase. | Uncharacterized membrane protein YhfC. | 0.682 |
CobA | SDB29038.1 | SAMN02983009_01411 | SAMN02983009_01410 | Uroporphyrinogen III methyltransferase / synthase. | Protein of unknown function. | 0.682 |
CobA | SDB29068.1 | SAMN02983009_01411 | SAMN02983009_01412 | Uroporphyrinogen III methyltransferase / synthase. | tRNA (cmo5U34)-methyltransferase. | 0.771 |
CobA | SDB29110.1 | SAMN02983009_01411 | SAMN02983009_01415 | Uroporphyrinogen III methyltransferase / synthase. | Reactive intermediate/imine deaminase. | 0.461 |
HemB | CobA | SAMN02983009_01413 | SAMN02983009_01411 | Porphobilinogen synthase; Belongs to the ALAD family. | Uroporphyrinogen III methyltransferase / synthase. | 0.996 |
HemB | HemC | SAMN02983009_01413 | SAMN02983009_01407 | Porphobilinogen synthase; Belongs to the ALAD family. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.998 |
HemB | HemL | SAMN02983009_01413 | SAMN02983009_01414 | Porphobilinogen synthase; Belongs to the ALAD family. | Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.999 |
HemB | SDB02534.1 | SAMN02983009_01413 | SAMN02983009_00066 | Porphobilinogen synthase; Belongs to the ALAD family. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.664 |
HemB | SDB29015.1 | SAMN02983009_01413 | SAMN02983009_01408 | Porphobilinogen synthase; Belongs to the ALAD family. | Hypothetical protein. | 0.409 |
HemB | SDB29030.1 | SAMN02983009_01413 | SAMN02983009_01409 | Porphobilinogen synthase; Belongs to the ALAD family. | Uncharacterized membrane protein YhfC. | 0.409 |
HemB | SDB29038.1 | SAMN02983009_01413 | SAMN02983009_01410 | Porphobilinogen synthase; Belongs to the ALAD family. | Protein of unknown function. | 0.409 |
HemB | SDB29068.1 | SAMN02983009_01413 | SAMN02983009_01412 | Porphobilinogen synthase; Belongs to the ALAD family. | tRNA (cmo5U34)-methyltransferase. | 0.509 |
HemB | SDB29110.1 | SAMN02983009_01413 | SAMN02983009_01415 | Porphobilinogen synthase; Belongs to the ALAD family. | Reactive intermediate/imine deaminase. | 0.774 |
HemC | CobA | SAMN02983009_01407 | SAMN02983009_01411 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Uroporphyrinogen III methyltransferase / synthase. | 0.999 |
HemC | HemB | SAMN02983009_01407 | SAMN02983009_01413 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.998 |
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