Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDB12698.1 | SDB24450.1 | SAMN02983009_00587 | SAMN02983009_01177 | Dihydroorotase. | Phosphoribosylformylglycinamidine synthase. | 0.455 |
SDB12698.1 | SDB30213.1 | SAMN02983009_00587 | SAMN02983009_01455 | Dihydroorotase. | Nucleobase:cation symporter-2, NCS2 family. | 0.567 |
SDB12698.1 | carA | SAMN02983009_00587 | SAMN02983009_00665 | Dihydroorotase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.984 |
SDB12698.1 | carB | SAMN02983009_00587 | SAMN02983009_00666 | Dihydroorotase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.986 |
SDB12698.1 | pyrB | SAMN02983009_00587 | SAMN02983009_00583 | Dihydroorotase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
SDB12698.1 | pyrD | SAMN02983009_00587 | SAMN02983009_00585 | Dihydroorotase. | Dihydroorotate dehydrogenase (NAD+) catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate. | 0.996 |
SDB12698.1 | pyrE | SAMN02983009_00587 | SAMN02983009_00588 | Dihydroorotase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.966 |
SDB12698.1 | pyrF | SAMN02983009_00587 | SAMN02983009_00586 | Dihydroorotase. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.945 |
SDB24450.1 | SDB12698.1 | SAMN02983009_01177 | SAMN02983009_00587 | Phosphoribosylformylglycinamidine synthase. | Dihydroorotase. | 0.455 |
SDB24450.1 | SDB30213.1 | SAMN02983009_01177 | SAMN02983009_01455 | Phosphoribosylformylglycinamidine synthase. | Nucleobase:cation symporter-2, NCS2 family. | 0.668 |
SDB24450.1 | SDB37579.1 | SAMN02983009_01177 | SAMN02983009_01798 | Phosphoribosylformylglycinamidine synthase. | Beta-aspartyl-dipeptidase (metallo-type); Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. | 0.526 |
SDB24450.1 | carA | SAMN02983009_01177 | SAMN02983009_00665 | Phosphoribosylformylglycinamidine synthase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.929 |
SDB24450.1 | carB | SAMN02983009_01177 | SAMN02983009_00666 | Phosphoribosylformylglycinamidine synthase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.538 |
SDB24450.1 | pyrB | SAMN02983009_01177 | SAMN02983009_00583 | Phosphoribosylformylglycinamidine synthase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.566 |
SDB24450.1 | pyrD | SAMN02983009_01177 | SAMN02983009_00585 | Phosphoribosylformylglycinamidine synthase. | Dihydroorotate dehydrogenase (NAD+) catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate. | 0.545 |
SDB24450.1 | pyrE | SAMN02983009_01177 | SAMN02983009_00588 | Phosphoribosylformylglycinamidine synthase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.569 |
SDB24450.1 | pyrF | SAMN02983009_01177 | SAMN02983009_00586 | Phosphoribosylformylglycinamidine synthase. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.519 |
SDB24450.1 | xpt | SAMN02983009_01177 | SAMN02983009_01454 | Phosphoribosylformylglycinamidine synthase. | Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. | 0.687 |
SDB30213.1 | SDB12698.1 | SAMN02983009_01455 | SAMN02983009_00587 | Nucleobase:cation symporter-2, NCS2 family. | Dihydroorotase. | 0.567 |
SDB30213.1 | SDB24450.1 | SAMN02983009_01455 | SAMN02983009_01177 | Nucleobase:cation symporter-2, NCS2 family. | Phosphoribosylformylglycinamidine synthase. | 0.668 |
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