Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DprA | FtsY | SAMN02983009_01705 | SAMN02983009_01712 | DNA processing protein. | Fused signal recognition particle receptor. | 0.597 |
DprA | Pta | SAMN02983009_01705 | SAMN02983009_01713 | DNA processing protein. | Phosphate acetyltransferase. | 0.417 |
DprA | SDB35487.1 | SAMN02983009_01705 | SAMN02983009_01704 | DNA processing protein. | Tetratricopeptide repeat-containing protein. | 0.744 |
DprA | SDB35550.1 | SAMN02983009_01705 | SAMN02983009_01708 | DNA processing protein. | Phage integrase, N-terminal SAM-like domain. | 0.715 |
DprA | SDB35580.1 | SAMN02983009_01705 | SAMN02983009_01710 | DNA processing protein. | Hypothetical protein. | 0.729 |
DprA | SDB35597.1 | SAMN02983009_01705 | SAMN02983009_01711 | DNA processing protein. | Hypothetical protein. | 0.571 |
DprA | TopA | SAMN02983009_01705 | SAMN02983009_01706 | DNA processing protein. | DNA topoisomerase-1. | 0.943 |
DprA | YqeH | SAMN02983009_01705 | SAMN02983009_01709 | DNA processing protein. | Hypothetical protein. | 0.618 |
DprA | trmFO | SAMN02983009_01705 | SAMN02983009_01707 | DNA processing protein. | methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | 0.692 |
DprA | xseA | SAMN02983009_01705 | SAMN02983009_01703 | DNA processing protein. | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.727 |
FtsY | DprA | SAMN02983009_01712 | SAMN02983009_01705 | Fused signal recognition particle receptor. | DNA processing protein. | 0.597 |
FtsY | Pta | SAMN02983009_01712 | SAMN02983009_01713 | Fused signal recognition particle receptor. | Phosphate acetyltransferase. | 0.579 |
FtsY | SDB35487.1 | SAMN02983009_01712 | SAMN02983009_01704 | Fused signal recognition particle receptor. | Tetratricopeptide repeat-containing protein. | 0.565 |
FtsY | SDB35550.1 | SAMN02983009_01712 | SAMN02983009_01708 | Fused signal recognition particle receptor. | Phage integrase, N-terminal SAM-like domain. | 0.707 |
FtsY | SDB35580.1 | SAMN02983009_01712 | SAMN02983009_01710 | Fused signal recognition particle receptor. | Hypothetical protein. | 0.737 |
FtsY | SDB35597.1 | SAMN02983009_01712 | SAMN02983009_01711 | Fused signal recognition particle receptor. | Hypothetical protein. | 0.773 |
FtsY | TopA | SAMN02983009_01712 | SAMN02983009_01706 | Fused signal recognition particle receptor. | DNA topoisomerase-1. | 0.615 |
FtsY | YqeH | SAMN02983009_01712 | SAMN02983009_01709 | Fused signal recognition particle receptor. | Hypothetical protein. | 0.752 |
FtsY | trmFO | SAMN02983009_01712 | SAMN02983009_01707 | Fused signal recognition particle receptor. | methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | 0.700 |
FtsY | xseA | SAMN02983009_01712 | SAMN02983009_01703 | Fused signal recognition particle receptor. | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.579 |
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