STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB36109.1Hypothetical protein. (279 aa)    
Predicted Functional Partners:
SDB36143.1
CRISPR type III-A/MTUBE-associated RAMP protein Csm4.
  
 
 0.933
SDB36177.1
CRISPR type III-A/MTUBE-associated protein Csm2.
  
 
 0.933
SDB36162.1
CRISPR-associated protein Csm3.
  
 
 0.890
SDB36191.1
CRISPR-associated protein Csm1.
  
 
 0.887
SDB45042.1
CRISPR-associated protein Csm3.
  
 
 0.768
SDB36207.1
Hypothetical protein.
       0.555
SDB36223.1
Hypothetical protein.
       0.554
SDB36124.1
CRISPR-associated protein Csm5.
       0.543
SDB36233.1
CRISPR-associated protein, TM1812 family.
       0.496
Your Current Organism:
Fusobacterium necrophorum
NCBI taxonomy Id: 859
Other names: ATCC 25286, Acinomyces pseudonecrophorus, Actinomyces necrophorus, Bacillus necrophorus, Bacillus necroseos, Bacillus necrosus, Bacterium necrophorum, Bacteroides necrophorus, CCUG 9994, CIP 104559, Corynebacterium necrophorum, DSM 21784, F. necrophorum, Fusibacterium necrophorum, Fusiformis hemolyticus, Fusiformis necrophorus, JCM 3718, NCTC 13726, Necrobacterium necrophorus, Proactinomyces necrophorus, Sphaerophorus necrophorus, Sphaerophorus pseudonecrophorus, Streptothrix necrophorus, Streptothrix necuphtora, VPI 2891
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.