Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SDB42194.1Energy-coupling factor transport system permease protein. (228 aa)    
Predicted Functional Partners:
SDB42210.1
Energy-coupling factor transport system ATP-binding protein.
 
 
 0.977
SDB42181.1
Energy-coupling factor transport system substrate-specific component.
 
   
 0.952
SDB42168.1
ATP-binding cassette, subfamily B.
 
     0.825
SDB42155.1
ATP-binding cassette, subfamily B.
 
     0.812
SDB42140.1
AraC-type DNA-binding protein.
 
     0.765
SDB07977.1
ATP-binding cassette, subfamily B.
  
     0.755
SDB07968.1
ATP-binding cassette, subfamily B.
  
     0.743
SDB20863.1
Transcriptional regulator, TetR family.
 
     0.652
SDB42226.1
Hypothetical protein.
       0.598
SDB42313.1
ATP-binding cassette, subfamily B.
 
   
 0.590
Your Current Organism:
Fusobacterium necrophorum
NCBI taxonomy Id: 859
Other names: ATCC 25286, Acinomyces pseudonecrophorus, Actinomyces necrophorus, Bacillus necrophorus, Bacillus necroseos, Bacillus necrosus, Bacterium necrophorum, Bacteroides necrophorus, CCUG 9994, CIP 104559, Corynebacterium necrophorum, DSM 21784, F. necrophorum, Fusibacterium necrophorum, Fusiformis hemolyticus, Fusiformis necrophorus, JCM 3718, NCTC 13726, Necrobacterium necrophorus, Proactinomyces necrophorus, Sphaerophorus necrophorus, Sphaerophorus pseudonecrophorus, Streptothrix necrophorus, Streptothrix necuphtora, VPI 2891
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