STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB43025.1Iron complex transport system ATP-binding protein. (254 aa)    
Predicted Functional Partners:
SDB43013.1
Iron complex transport system permease protein.
   0.967
SDB42993.1
ABC-type Fe3+-hydroxamate transport system, substrate-binding protein.
 
   0.931
SDB07124.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
   0.852
SDB16844.1
Iron complex transport system permease protein.
 
   0.807
SDB07138.1
Iron complex transport system substrate-binding protein.
 
   0.789
SDB43041.1
Putative efflux protein, MATE family.
  
    0.771
SDB16858.1
Iron complex transport system substrate-binding protein.
  
   0.756
SDB16791.1
Iron complex transport system permease protein.
 
   0.706
SDB05980.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
   0.686
SDB43068.1
Hypothetical protein.
  
    0.672
Your Current Organism:
Fusobacterium necrophorum
NCBI taxonomy Id: 859
Other names: ATCC 25286, Acinomyces pseudonecrophorus, Actinomyces necrophorus, Bacillus necrophorus, Bacillus necroseos, Bacillus necrosus, Bacterium necrophorum, Bacteroides necrophorus, CCUG 9994, CIP 104559, Corynebacterium necrophorum, DSM 21784, F. necrophorum, Fusibacterium necrophorum, Fusiformis hemolyticus, Fusiformis necrophorus, JCM 3718, NCTC 13726, Necrobacterium necrophorus, Proactinomyces necrophorus, Sphaerophorus necrophorus, Sphaerophorus pseudonecrophorus, Streptothrix necrophorus, Streptothrix necuphtora, VPI 2891
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.