STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB47472.1ORF6N domain-containing protein. (298 aa)    
Predicted Functional Partners:
SDB47484.1
CSN8/PSMD8/EIF3K family protein.
       0.773
SDB09559.1
Uncharacterized conserved protein.
      0.771
SDB47499.1
Adenine-specific DNA-methyltransferase.
       0.628
SDB47511.1
Type III restriction enzyme, res subunit.
       0.628
SDB48477.1
Hypothetical protein.
  
     0.590
SDB48424.1
Hypothetical protein.
  
     0.589
SDB48134.1
Hypothetical protein.
  
     0.569
SDB47459.1
DNA-binding transcriptional regulator, XRE family.
 
     0.555
SDB48195.1
Hypothetical protein.
  
     0.537
SDB02534.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
   
 
 0.485
Your Current Organism:
Fusobacterium necrophorum
NCBI taxonomy Id: 859
Other names: ATCC 25286, Acinomyces pseudonecrophorus, Actinomyces necrophorus, Bacillus necrophorus, Bacillus necroseos, Bacillus necrosus, Bacterium necrophorum, Bacteroides necrophorus, CCUG 9994, CIP 104559, Corynebacterium necrophorum, DSM 21784, F. necrophorum, Fusibacterium necrophorum, Fusiformis hemolyticus, Fusiformis necrophorus, JCM 3718, NCTC 13726, Necrobacterium necrophorus, Proactinomyces necrophorus, Sphaerophorus necrophorus, Sphaerophorus pseudonecrophorus, Streptothrix necrophorus, Streptothrix necuphtora, VPI 2891
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.