STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900166665_03464Unannotated protein. (255 aa)    
Predicted Functional Partners:
GCA_900166665_00738
Unannotated protein.
   
 0.838
GCA_900166665_01052
Unannotated protein.
  
 0.835
GCA_900166665_03468
Unannotated protein.
    
  0.835
GCA_900166665_01615
Unannotated protein.
 
 
 0.801
GCA_900166665_04543
Unannotated protein.
  
 0.801
GCA_900166665_04545
Unannotated protein.
  
 0.801
GCA_900166665_04351
Unannotated protein.
 
 
  0.794
GCA_900166665_02885
Unannotated protein.
  
  
  0.792
GCA_900166665_02899
Unannotated protein.
   
 0.786
GCA_900166665_04668
Unannotated protein.
    
  0.786
Your Current Organism:
Bacillus gottheilii
NCBI taxonomy Id: 859144
Other names: B. gottheilii, Bacillus gottheilii Seiler et al. 2013, Bacillus sp. DSM 23668, Bacillus sp. WCC 4584, Bacillus sp. WCC 4585, CCUG 59876, DSM 23668, LMG 25856, LMG:25856, strain WCC 4585
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.