Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HP_0102Conserved hypothetical protein; Similar to PID:1197639 PID:1197649 percent identity: 29.26; identified by sequence similarity; putative. (259 aa)    
Predicted Functional Partners:
HP_0043
Mannose-6-phosphate isomerase (pmi) or (algA); Similar to PIR:A25638 percent identity: 42.83; identified by sequence similarity; putative; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.736
HP_0103
Methyl-accepting chemotaxis protein (tlpB); Similar to GB:L29189 SP:P39217 PID:459691 GB:AL009126 percent identity: 30.71; identified by sequence similarity; putative.
       0.678
HP_0421
Type 1 capsular polysaccharide biosynthesis protein J (capJ); Similar to GB:U10927 SP:P39859 PID:506706 percent identity: 29.00; identified by sequence similarity; putative.
  
  
 0.506
HP_1275
Phosphomannomutase (algC){Pseudomonas aeruginosa}; Similar to GB:M60873 SP:P26276 GB:S43866 PID:150994 percent identity: 39.00; identified by sequence similarity; putative.
     
 0.485
gmd
GDP-D-mannose dehydratase (rfbD); Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.470
HP_0360
UDP-glucose 4-epimerase; Similar to GB:Z25478 PID:396521 SP:Q59083 percent identity: 43.08; identified by sequence similarity; putative; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
   
 0.469
fcl
Nodulation protein (nolK); Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
 
  
 0.460
HP_0646
UDP-glucose pyrophosphorylase (galU); Similar to GP:1345068 percent identity: 65.56; identified by sequence similarity; putative.
     
 0.438
HP_1581
Methicillin resistance protein (llm); Similar to GB:D21131 PID:531265 percent identity: 29.17; identified by sequence similarity; putative.
     
 0.426
HP_1283
Predicted coding region HP1283; Hypothetical protein; identified by GeneMark; putative.
     
 0.417
Your Current Organism:
Helicobacter pylori
NCBI taxonomy Id: 85962
Other names: H. pylori 26695, Helicobacter pylori (strain 26695), Helicobacter pylori 26695, Helicobacter pylori ATCC 700392, Helicobacter pylori KE26695, Helicobacter pylori str. 26695, Helicobacter pylori strain 26695
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.