STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HP_0435Predicted coding region HP0435; Hypothetical protein; identified by GeneMark; putative. (191 aa)    
Predicted Functional Partners:
HP_0447
Conserved hypothetical protein; Similar to SP:P34243 PID:395256 PID:486007 percent identity: 38.22; identified by sequence similarity; putative.
 
     0.976
HP_0432
Protein kinase C-like protein; Similar to SP:P28867 percent identity: 30.00; identified by sequence similarity; putative.
 
     0.883
HP_1517
Type IIS restriction enzyme R and M protein (ECO57IR); Similar to GB:M74821 SP:P25239 GB:X61122 PID:145139 PID:41321 percent identity: 26.74; identified by sequence similarity; putative.
  
    0.796
HP_1392
Fibronectin/fibrinogen-binding protein; Similar to GB:L28919 PID:496254 percent identity: 25.71; identified by sequence similarity; putative.
 
    0.789
HP_0781
Predicted coding region HP0781; Hypothetical protein; identified by GeneMark; putative.
  
    0.783
HP_0436
Predicted coding region HP0436; Hypothetical protein; identified by GeneMark; putative.
       0.773
HP_0452
Conserved hypothetical protein; Similar to GP:2983256 percent identity: 34.34; identified by sequence similarity; putative.
 
     0.642
HP_1079
Predicted coding region HP1079; Has nucleotide phosphatase activity toward ATP and GTP, but not toward CTP, TTP and ADP.
   
    0.621
HP_0433
Predicted coding region HP0433; Hypothetical protein; identified by GeneMark; putative.
  
    0.586
HP_0434
Predicted coding region HP0434; Hypothetical protein; identified by GeneMark; putative.
       0.570
Your Current Organism:
Helicobacter pylori
NCBI taxonomy Id: 85962
Other names: H. pylori 26695, Helicobacter pylori (strain 26695), Helicobacter pylori 26695, Helicobacter pylori ATCC 700392, Helicobacter pylori KE26695, Helicobacter pylori str. 26695, Helicobacter pylori strain 26695
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.