STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HP_0696N-methylhydantoinase; Similar to GB:L77117 PID:1591627 percent identity: 26.92; identified by sequence similarity; putative. (765 aa)    
Predicted Functional Partners:
HP_0695
Hydantoin utilization protein A (hyuA); Similar to SP:Q01262 PID:151282 PID:216831 percent identity: 28.57; identified by sequence similarity; putative.
 0.999
HP_0697
Predicted coding region HP0697; Hypothetical protein; identified by GeneMark; putative.
 0.999
HP_0056
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
  
 
  0.747
HP_0698
Predicted coding region HP0698; Hypothetical protein; identified by GeneMark; putative.
     
 0.538
HP_0690
Acetyl coenzyme A acetyltransferase (thiolase) (fadA); Similar to GB:L42023 SP:P44873 PID:1005748 PID:1220864 PID:1205019 percent identity: 52.04; identified by sequence similarity; putative; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.519
sodB
Superoxide dismutase (sodB); Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the iron/manganese superoxide dismutase family.
  
   0.483
dgkA
Diacylglycerol kinase (dgkA); Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
     
 0.455
gyrA
DNA gyrase, sub A (gyrA); A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
  
    0.433
gdhA
Glutamate dehydrogenase (gdhA); Catalyzes the reversible oxidative deamination of glutamate to alpha-ketoglutarate and ammonia.
    
  0.430
HP_1118
Gamma-glutamyltranspeptidase (ggt); Similar to GB:M28722 SP:P18956 PID:146133 PID:466583 PID:606382 percent identity: 53.21; identified by sequence similarity; putative.
   
 
  0.414
Your Current Organism:
Helicobacter pylori
NCBI taxonomy Id: 85962
Other names: H. pylori 26695, Helicobacter pylori (strain 26695), Helicobacter pylori 26695, Helicobacter pylori ATCC 700392, Helicobacter pylori KE26695, Helicobacter pylori str. 26695, Helicobacter pylori strain 26695
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