STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HP_0710Conserved hypothetical protein; Similar to GP:1800185 percent identity: 33.71; identified by sequence similarity; putative. (660 aa)    
Predicted Functional Partners:
HP_0711
Predicted coding region HP0711; Hypothetical protein; identified by GeneMark; putative.
       0.481
HP_0412
Predicted coding region HP0412; Hypothetical protein; identified by GeneMark; putative.
      
 0.455
HP_0712
Predicted coding region HP0712; Hypothetical protein; identified by GeneMark; putative.
       0.449
HP_0709
Conserved hypothetical protein; Similar to GB:L77117 SP:Q59045 PID:1592233 percent identity: 49.64; identified by sequence similarity; putative.
       0.415
Your Current Organism:
Helicobacter pylori
NCBI taxonomy Id: 85962
Other names: H. pylori 26695, Helicobacter pylori (strain 26695), Helicobacter pylori 26695, Helicobacter pylori ATCC 700392, Helicobacter pylori KE26695, Helicobacter pylori str. 26695, Helicobacter pylori strain 26695
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