STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HP_0737Conserved hypothetical integral membrane protein; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG). (158 aa)    
Predicted Functional Partners:
HP_1016
Phosphatidylglycerophosphate synthase (pgsA); Similar to GB:M12299 SP:P06978 PID:473749 GB:U00096 PID:1736571 percent identity: 35.37; identified by sequence similarity; putative; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.965
HP_0190
Conserved hypothetical secreted protein; Similar to GP:1787284 percent identity: 31.43; identified by sequence similarity; putative.
     
 0.924
HP_0851
Conserved hypothetical integral membrane protein; Similar to GB:L77117 SP:Q57819 PID:1591081 percent identity: 37.25; identified by sequence similarity; putative.
  
 
 0.660
HP_0736
Phosphoserine aminotransferase (serC); Similar to GB:L77117 PID:1591623 percent identity: 30.73; identified by sequence similarity; putative.
 
    0.581
ribB
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase (ribA, ribB); Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family.
     
 0.581
HP_1505
Riboflavin biosynthesis protein (ribG); Similar to GB:L42023 SP:P44326 PID:1006089 PID:1221052 PID:1205192 percent identity: 33.10; identified by sequence similarity; putative.
  
  
 0.574
ddl
D-alanine:D-alanine ligase A (ddlA); Cell wall formation.
       0.558
HP_0739
2-hydroxy-6-oxohepta-2,4-dienoate hydrolase; Similar to PID:1652609 percent identity: 26.70; identified by sequence similarity; putative.
       0.558
HP_0740
UDP-MurNac-pentapeptide presynthetase (murF); Similar to PID:1165288 GB:AE000783 percent identity: 25.70; identified by sequence similarity; putative.
       0.558
HP_0741
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58276 PID:1499694 percent identity: 30.23; identified by sequence similarity; putative.
       0.550
Your Current Organism:
Helicobacter pylori
NCBI taxonomy Id: 85962
Other names: H. pylori 26695, Helicobacter pylori (strain 26695), Helicobacter pylori 26695, Helicobacter pylori ATCC 700392, Helicobacter pylori KE26695, Helicobacter pylori str. 26695, Helicobacter pylori strain 26695
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.