STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Cooccurrence
Coexpression
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[Homology]
Score
HP_0803Predicted coding region HP0803; Hypothetical protein; identified by GeneMark; putative. (279 aa)    
Predicted Functional Partners:
ribA
GTP cyclohydrolase II (ribA); Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.
       0.640
ribB
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase (ribA, ribB); Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family.
     
 0.547
HP_0801
Molybdopterin converting factor, subunit 1 (moaD); Similar to SP:P30748 PID:42011 GB:U00096 PID:1651357 PID:1787002 percent identity: 36.67; identified by sequence similarity; putative.
       0.535
moaE
Molybdopterin converting factor, subunit 2 (moaE); Converts molybdopterin precursor Z into molybdopterin. This requires the incorporation of two sulfur atoms into precursor Z to generate a dithiolene group. The sulfur is provided by MoaD (By similarity).
       0.528
moaC
Molybdenum cofactor biosynthesis protein C (moaC); Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
       0.522
mog
Molybdopterin biosynthesis protein (mog); Catalyzes the adenylation of molybdopterin as part of the biosynthesis of the molybdenum-cofactor.
       0.522
HP_1489
Lipase-like protein; Similar to PID:1139569 percent identity: 21.69; identified by sequence similarity; putative.
  
     0.440
hpaA
Flagellar sheath adhesin hpaA; Similar to GB:X61574 PID:732736 PID:1054732 PID:1016283 GB:AE000511 percent identity: 100.00; identified by sequence similarity; putative.
       0.424
Your Current Organism:
Helicobacter pylori
NCBI taxonomy Id: 85962
Other names: H. pylori 26695, Helicobacter pylori (strain 26695), Helicobacter pylori 26695, Helicobacter pylori ATCC 700392, Helicobacter pylori KE26695, Helicobacter pylori str. 26695, Helicobacter pylori strain 26695
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