STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HP_1092Flagellar basal-body rod protein (flgG); Similar to SP:P16439 PID:47677 percent identity: 35.48; identified by sequence similarity; putative. (269 aa)    
Predicted Functional Partners:
HP_1558
Flagellar basal-body rod protein (flgC); Proximal rod protein; similar to PID:1165277 PID:1196316 SP:Q57466 GB:AE000783 percent identity: 46.04; identified by sequence similarity; putative; Belongs to the flagella basal body rod proteins family.
 
 0.994
HP_1585
Flagellar basal-body rod protein (flgG); Similar to SP:P16439 PID:47677 percent identity: 47.69; identified by sequence similarity; putative; Belongs to the flagella basal body rod proteins family.
 
 
0.993
flgI
Flagellar basal-body P-ring protein (flgI); Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 0.979
flgH
Flagellar basal-body L-ring protein (flgH); Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.979
HP_1030
fliY protein (fliY); Similar to GB:M86738 SP:P24073 PID:142926 PID:551704 GB:AL009126 percent identity: 29.27; identified by sequence similarity; putative.
 
 
 0.979
HP_0907
Hook assembly protein, flagella (flgD); Required for flagellar hook formation. May act as a scaffolding protein.
 
 
 0.968
HP_1559
Flagellar basal-body rod protein (flgB); Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.962
HP_0351
Flagellar basal-body M-ring protein (fliF); The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.957
fliG
Flagellar motor switch protein (fliG); One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation. Required for flagellum synthesis and motility. In H.pylori four flagellar switch proteins are encoded, FliG, FliM, FliN and FliY.
 
 
 0.935
HP_1119
Flagellar hook-associated protein 1 (HAP1) (flgK); Similar to GB:X51738 SP:P15932 GB:X52093 PID:47679 percent identity: 27.56; identified by sequence similarity; putative.
 
  
 0.932
Your Current Organism:
Helicobacter pylori
NCBI taxonomy Id: 85962
Other names: H. pylori 26695, Helicobacter pylori (strain 26695), Helicobacter pylori 26695, Helicobacter pylori ATCC 700392, Helicobacter pylori KE26695, Helicobacter pylori str. 26695, Helicobacter pylori strain 26695
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.