STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HP_1383Restriction modification system S subunit; Similar to GB:L77117 percent identity: 37.62; identified by sequence similarity; putative. (160 aa)    
Predicted Functional Partners:
HP_1403
Type I restriction enzyme M protein (hsdM); Similar to SP:P10484 GB:X75452 PID:41748 PID:450688 percent identity: 37.08; identified by sequence similarity; putative.
 
   0.899
HP_1402
Type I restriction enzyme R protein (hsdR); Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
    0.890
HP_1404
Type I restriction enzyme S protein (hsdS); Similar to GB:L77117 percent identity: 26.77; identified by sequence similarity; putative.
  
   
 0.875
HP_1401
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58610 PID:1591842 percent identity: 27.47; identified by sequence similarity; putative.
 
     0.803
HP_0462
Type I restriction enzyme S protein (hsdS); Similar to GB:L77117 percent identity: 32.49; identified by sequence similarity; putative.
  
     0.714
HP_0850
Type I restriction enzyme M protein (hsdM); Similar to SP:P10484 GB:X75452 PID:41748 PID:450688 percent identity: 54.42; identified by sequence similarity; putative.
  
   0.624
HP_0463
Type I restriction enzyme M protein (hsdM); Similar to SP:P10484 GB:X75452 PID:41748 PID:450688 percent identity: 28.71; identified by sequence similarity; putative.
   
   0.611
HP_1472
Type IIS restriction enzyme M protein (mod); Similar to GB:L17341 SP:Q07605 PID:304140 percent identity: 32.45; identified by sequence similarity; putative.
   
   0.611
HP_1471
Type IIS restriction enzyme R protein (BCGIB); Contingency gene; similar to GB:L17341 SP:Q07606 PID:304141 percent identity: 29.18; identified by sequence similarity; putative.
   
   0.610
HP_1382
Predicted coding region HP1382; Hypothetical protein; identified by GeneMark; putative.
       0.572
Your Current Organism:
Helicobacter pylori
NCBI taxonomy Id: 85962
Other names: H. pylori 26695, Helicobacter pylori (strain 26695), Helicobacter pylori 26695, Helicobacter pylori ATCC 700392, Helicobacter pylori KE26695, Helicobacter pylori str. 26695, Helicobacter pylori strain 26695
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.