STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yeeXConserved hypothetical protein; Belongs to the UPF0265 family. (110 aa)    
Predicted Functional Partners:
omp
Outer membrane protein.
  
     0.764
lptC
Conserved hypothetical protein; Required for the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane. Belongs to the LptC family.
  
     0.763
rlpB
Hypothetical protein.
  
     0.763
lolB
Outer membrane lipoprotein LolB.
  
     0.750
zapA
Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
  
     0.736
yhcB
Conserved hypothetical protein.
  
     0.731
smpA
Small protein A.
  
    0.724
holD
DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.
  
     0.704
yjeP
Putative membrane protein/mechanosensitive ion channel.
  
     0.702
lptA
Lipopolysaccharide transport periplasmic protein.
  
     0.667
Your Current Organism:
Blochmannia vafer
NCBI taxonomy Id: 859654
Other names: C. Blochmannia vafer str. BVAF, Candidatus Blochmannia vafer BVAF, Candidatus Blochmannia vafer str. BVAF, Candidatus Blochmannia vafer strain BVAF
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.