Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CQY22_009350 | CQY22_010990 | GCA_900073015_00926 | GCA_900073015_00531 | Unannotated protein. | Unannotated protein. | 0.790 |
CQY22_009350 | nucS | GCA_900073015_00926 | GCA_900073015_00532 | Unannotated protein. | Unannotated protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.790 |
CQY22_010975 | CQY22_010990 | GCA_900073015_00534 | GCA_900073015_00531 | Unannotated protein. | Unannotated protein. | 0.513 |
CQY22_010975 | nucS | GCA_900073015_00534 | GCA_900073015_00532 | Unannotated protein. | Unannotated protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.660 |
CQY22_010990 | CQY22_009350 | GCA_900073015_00531 | GCA_900073015_00926 | Unannotated protein. | Unannotated protein. | 0.790 |
CQY22_010990 | CQY22_010975 | GCA_900073015_00531 | GCA_900073015_00534 | Unannotated protein. | Unannotated protein. | 0.513 |
CQY22_010990 | GCA_900073015_02505 | GCA_900073015_00531 | GCA_900073015_02505 | Unannotated protein. | Unannotated protein. | 0.593 |
CQY22_010990 | GCA_900073015_03598 | GCA_900073015_00531 | GCA_900073015_03598 | Unannotated protein. | Unannotated protein. | 0.626 |
CQY22_010990 | nucS | GCA_900073015_00531 | GCA_900073015_00532 | Unannotated protein. | Unannotated protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.925 |
CQY22_010990 | rpoA | GCA_900073015_00531 | GCA_900073015_01522 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.618 |
CQY22_010990 | rpoB | GCA_900073015_00531 | GCA_900073015_01612 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.672 |
CQY22_010990 | rpoC | GCA_900073015_00531 | GCA_900073015_01611 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.687 |
CQY22_010990 | rpoZ | GCA_900073015_00531 | GCA_900073015_00010 | Unannotated protein. | Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.617 |
CQY22_010990 | rsrA | GCA_900073015_00531 | GCA_900073015_02947 | Unannotated protein. | Unannotated protein. | 0.626 |
GCA_900073015_02505 | CQY22_010990 | GCA_900073015_02505 | GCA_900073015_00531 | Unannotated protein. | Unannotated protein. | 0.593 |
GCA_900073015_03598 | CQY22_010990 | GCA_900073015_03598 | GCA_900073015_00531 | Unannotated protein. | Unannotated protein. | 0.626 |
nucS | CQY22_009350 | GCA_900073015_00532 | GCA_900073015_00926 | Unannotated protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | Unannotated protein. | 0.790 |
nucS | CQY22_010975 | GCA_900073015_00532 | GCA_900073015_00534 | Unannotated protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | Unannotated protein. | 0.660 |
nucS | CQY22_010990 | GCA_900073015_00532 | GCA_900073015_00531 | Unannotated protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | Unannotated protein. | 0.925 |
nucS | rpoZ | GCA_900073015_00532 | GCA_900073015_00010 | Unannotated protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.698 |
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