STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQY22_013745Unannotated protein. (481 aa)    
Predicted Functional Partners:
mftF
Unannotated protein.
  
 
  0.738
lysS
Unannotated protein; Belongs to the class-II aminoacyl-tRNA synthetase family.
 
   
 0.675
CQY22_010940
Unannotated protein.
  
  0.641
GCA_900073015_01783
Unannotated protein.
  
  0.641
CQY22_018460
Unannotated protein.
  
  0.641
CQY22_016605
Unannotated protein.
  
  0.641
GCA_900073015_00580
Unannotated protein.
       0.636
CQY22_006300
Unannotated protein.
 
  
  0.609
CQY22_006465
Unannotated protein.
  
     0.585
eccD
Unannotated protein.
  
     0.578
Your Current Organism:
Mycolicibacterium brumae
NCBI taxonomy Id: 85968
Other names: ATCC 51384, CCUG 37586, CIP 103465, DSM 44177, JCM 12273, M. brumae, Mycobacterium brumae, strain CR-270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.