Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CQY22_007755 | CQY22_007920 | GCA_900073015_02897 | GCA_900073015_02864 | Unannotated protein. | Unannotated protein. | 0.842 |
CQY22_007755 | CQY22_012510 | GCA_900073015_02897 | GCA_900073015_00699 | Unannotated protein. | Unannotated protein. | 0.886 |
CQY22_007755 | CQY22_015550 | GCA_900073015_02897 | GCA_900073015_03818 | Unannotated protein. | Unannotated protein. | 0.848 |
CQY22_007755 | alaS | GCA_900073015_02897 | GCA_900073015_00041 | Unannotated protein. | Unannotated protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.975 |
CQY22_007755 | rpoA | GCA_900073015_02897 | GCA_900073015_01522 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.952 |
CQY22_007755 | rpoB | GCA_900073015_02897 | GCA_900073015_01612 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.929 |
CQY22_007755 | rpoZ | GCA_900073015_02897 | GCA_900073015_00010 | Unannotated protein. | Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.927 |
CQY22_007920 | CQY22_007755 | GCA_900073015_02864 | GCA_900073015_02897 | Unannotated protein. | Unannotated protein. | 0.842 |
CQY22_007920 | CQY22_012510 | GCA_900073015_02864 | GCA_900073015_00699 | Unannotated protein. | Unannotated protein. | 0.850 |
CQY22_007920 | CQY22_015265 | GCA_900073015_02864 | GCA_900073015_01408 | Unannotated protein. | Unannotated protein. | 0.937 |
CQY22_007920 | CQY22_015550 | GCA_900073015_02864 | GCA_900073015_03818 | Unannotated protein. | Unannotated protein. | 0.522 |
CQY22_007920 | CQY22_017100 | GCA_900073015_02864 | GCA_900073015_03015 | Unannotated protein. | Unannotated protein. | 0.943 |
CQY22_007920 | CQY22_017400 | GCA_900073015_02864 | GCA_900073015_03292 | Unannotated protein. | Unannotated protein. | 0.842 |
CQY22_007920 | rpoA | GCA_900073015_02864 | GCA_900073015_01522 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.989 |
CQY22_007920 | rpoB | GCA_900073015_02864 | GCA_900073015_01612 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.989 |
CQY22_007920 | rpoZ | GCA_900073015_02864 | GCA_900073015_00010 | Unannotated protein. | Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.989 |
CQY22_012510 | CQY22_007755 | GCA_900073015_00699 | GCA_900073015_02897 | Unannotated protein. | Unannotated protein. | 0.886 |
CQY22_012510 | CQY22_007920 | GCA_900073015_00699 | GCA_900073015_02864 | Unannotated protein. | Unannotated protein. | 0.850 |
CQY22_012510 | CQY22_015265 | GCA_900073015_00699 | GCA_900073015_01408 | Unannotated protein. | Unannotated protein. | 0.847 |
CQY22_012510 | CQY22_015550 | GCA_900073015_00699 | GCA_900073015_03818 | Unannotated protein. | Unannotated protein. | 0.935 |
page 1 of 4