STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK22188.1Conserved hypothetical protein. (126 aa)    
Predicted Functional Partners:
AEK22189.1
Hypothetical protein; Weak similarity to UniProt:Q8CGY8; Tetratricopeptide repeat (SM00028); TPR-like (SSF48452); Tetratricopeptide repeat-containing (PS50293); TETRATRICOPEPTIDE REPEAT PROTEIN, TPR (PTHR23083:SF20); Tetratricopeptide repeat (PS50005); Tetratricopeptide-like helical (G3DSA:1.25.40.10); TETRATRICOPEPTIDE REPEAT PROTEIN, TPR (PTHR23083); Tetratricopeptide TPR-1 (PF00515); Protein involved in binding.
       0.773
AEK22190.1
Hypothetical protein; Weak similarity to UniProt:O34748; Undefined Gene3D domain (G3DSA:3.40.50.300); P-loop containing nucleoside triphosphate hydrolases (SSF52540); DNA/RNA helicase, C-terminal (PF00271); DNA HELICASE RECQ (PTHR13710:SF11); DNA/RNA helicase, DEAD/DEAH box type, N-terminal (PF00270); Helicase, superfamily 1/2, ATP-binding domain (PS51192); DEAD-like helicase, N-terminal (SM00487); DNA helicase, ATP-dependent, RecQ type (PTHR13710); DUF559 (PF04480); DNA/RNA helicase, C-terminal (PS51194); DNA/RNA helicase, C-terminal (SM00490); Protein involved in ATP-dependent helica [...]
       0.773
AEK22191.1
Hypothetical protein; 1 transmembrane domain; Interferon gamma (PD002435); Protein involved in interferon-gamma receptor binding and immune response.
       0.773
AEK22192.1
Hypothetical protein; Weak similarity to UniProt:P77234; SEL-1-LIKE PROTEIN (PTHR11102); Tetratricopeptide repeat-containing (PS50293); SEL-1-LIKE PROTEIN, SEL-1L (PTHR11102:SF11); Tetratricopeptide repeat (PS50005); Tetratricopeptide-like helical (G3DSA:1.25.40.10); HCP-like (SSF81901); Tetratricopeptide (SM00028); Sel1-like (SM00671); Sel1-like (PF08238); Protein involved in binding.
       0.773
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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