STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
AEK22358.1Putative transcriptional regulator, Crp/Fnr family; Cyclic nucleotide-binding-like (SSF51206); Cyclic nucleotide-binding (PF00027); RmlC-like jelly roll fold (G3DSA:2.60.120.10). (188 aa)    
Predicted Functional Partners:
AEK22789.1
AltName: Full=cAMP receptor protein;AltName: Full=cAMP regulatory protein; Cyclic nucleotide-binding-like (SSF51206); Cyclic nucleotide-binding (PF00027); RmlC-like jelly roll fold (G3DSA:2.60.120.10).
  
     0.736
AEK22359.1
Putative regulatory protein; Glucocorticoid receptor-like (DNA-binding domain) (SSF57716); Zinc finger, DksA/TraR C4-type (PS51128); Protein involved in zinc ion binding.
  
  
 0.558
AEK22357.1
N-terminus: SpI(LipoP); AltName: Full=Cation efflux system protein czcC;Flags: Precursor; 1 transmembrane domain; Integral outer membrane protein TolC, efflux pump component (SSF56954); Outer membrane efflux protein (PF02321); Protein involved in transporter activity and transport.
       0.524
AEK22645.1
Pyruvate dehydrogenase E1 component subunit beta; Transketolase-like, C-terminal (G3DSA:3.40.50.920); Undefined Gene3D domain (G3DSA:3.40.50.970); Dehydrogenase, E1 component (PF00676); Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (SSF52922); BRANCHED CHAIN ALPHA KETO ACID DEHYDROGENASE E1 BETA SUBUNIT (PTHR11624:SF21); Transketolase, C-terminal (PF02780); Thiamin diphosphate-binding fold (THDP-binding) (SSF52518); Transketolase-like, pyrimidine-binding domain (PF02779); DEHYDROGENASE RELATED (PTHR11624); Protein involved in catalytic activity, oxidoreductase [...]
 
 
   0.512
AEK23644.1
Sensor protein evgS; N-terminus: TMH(LipoP); Flags: Precursor; 3 transmembrane domains; Signal transduction histidine kinase, homodimeric (SSF47384); ATPase-like, ATP-binding domain (SSF55874); TETRACYCLINE RESISTANCE ELEMENT REGULATOR RTEA - BACTEROIDES THETAIOTAOMICRON (PTHR23283:SF38); Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (SM00388); Signal transduction histidine kinase, phosphotransfer (Hpt) domain (SSF47226); Undefined Gene3D domain (G3DSA:1.10.287.240); ATPase-like, ATP-binding domain (PF02518); Signal transduction histidine kinase, [...]
  
 
 0.510
AEK23059.1
Conserved hypothetical protein; RNA polymerase Rpb6 (PF01192); Protein involved in DNA binding, DNA-directed RNA polymerase activity and transcription, DNA-dependent.
  
 
   0.505
AEK22605.1
Hypothetical protein; Weak similarity to UniProt:O88799; N-terminus: SpI(LipoP); 1 transmembrane domain.
  
     0.489
AEK22154.1
Hypothetical protein; Putative endonuclease, Z1 domain (PF10593); P-loop containing nucleoside triphosphate hydrolases (SSF52540); Restriction endonuclease, type I, R subunit/Type III, Res subunit (PF04851); Protein involved in DNA binding, ATP binding and hydrolase activity.
    
  0.457
rpoB
RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.453
AEK22360.1
Lysine N-methyltransferase 7; N-terminus: SpI(LipoP); AltName: Full=Histone H3-K4 methyltransferase SETD7;Short=H3-K4-HMTase SETD7;AltName: Full=SET domain-containing protein 7;AltName: Full=SET7/9;AltName: Full=Lysine N-methyltransferase 7; MORN variant (PF07661); Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain (SSF82185).
       0.452
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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