STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK22368.1D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. (244 aa)    
Predicted Functional Partners:
AEK22369.1
Putative chloride channel protein clcB-like protein; N-terminus: TMH(LipoP); 10 transmembrane domains; Chloride channel, voltage gated (PF00654); Cystathionine (SM00116); Cystathionine beta-synthase, core (PS51371); VOLTAGE-GATED CLC-TYPE CHLORIDE CHANNEL ERIC (PTHR11689:SF14); Chloride channel, voltage gated (PR00762); CBS-domain (SSF54631); Chloride channel, core (G3DSA:1.10.3080.10); Cystathionine beta-synthase, core (PF00571); Chloride channel, core (SSF81340); Chloride channel, voltage gated (PTHR11689); Protein involved in voltage-gated chloride channel activity, ion channel acti [...]
       0.535
AEK22367.1
Putative PAS/PAC sensor protein; PAS (SM00091); PAS (TIGR00229); PAS fold-3 (PF08447); PAS (PS50112); Undefined Gene3D domain (G3DSA:3.30.450.20); PYP-like sensor domain (PAS domain) (SSF55785); PAC (SM00086); Protein involved in signal transducer activity, signal transduction and regulation of transcription, DNA-dependent.
       0.488
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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