STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK22424.1UPF0603 protein ygcG; Flags: Precursor; Protein of unknown function DUF477 (PF04536). (147 aa)    
Predicted Functional Partners:
AEK22423.1
UPF0603 protein ygcG; N-terminus: SpI(LipoP); Flags: Precursor; 3 transmembrane domains; Protein of unknown function DUF477 (PF04536).
 
     0.948
AEK22425.1
Hypothetical protein; N-terminus: TMH(LipoP); 1 transmembrane domain; LemA (PF04011).
 
     0.936
AEK22426.1
Putative transcriptional regulator protein; Undefined Gene3D domain (G3DSA:1.10.1660.10); Putative DNA binding domain (SSF46955); HTH transcriptional regulator, MerR (PS50937); HTH transcriptional regulator, MerR (SM00422); HTH transcriptional regulator, MerR (PF00376); Protein involved in transcription factor activity, nucleotide binding and regulation of transcription, DNA-dependent.
       0.797
AEK22427.1
Putative peptidase; N-terminus: SpI(LipoP); 1 transmembrane domain; PEPTIDASE-RELATED (PTHR21666); Peptidase M23 (PF01551); Duplicated hybrid motif (SSF51261); Peptidase M23B (PTHR21666:SF7); Protein involved in metalloendopeptidase activity and proteolysis.
       0.705
AEK23193.1
Conserved hypothetical protein; N-terminus: SpI(LipoP); 5 transmembrane domains; Protein of unknown function DUF477 (PF04536).
 
     0.658
alaS
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
       0.554
AEK22422.1
Hypothetical protein.
       0.543
AEK24080.1
Hypothetical protein; Weak similarity to UniProt:P05825; N-terminus: SpI(LipoP); TonB-dependent receptor, beta-barrel (PF00593); TonB-dependent receptor, plug (G3DSA:2.170.130.10); TonB-dependent receptor, beta-barrel (G3DSA:2.40.170.20); Porins (SSF56935); TonB-dependent receptor, plug (PF07715); Protein involved in receptor activity, transporter activity and transport.
  
     0.405
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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