STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK22453.1Hypothetical protein; UspA (PF00582); Adenine nucleotide alpha hydrolases-like (SSF52402); Rossmann-like alpha/beta/alpha sandwich fold (G3DSA:3.40.50.620); Universal stress protein A (PR01438); Protein involved in response to stress. (285 aa)    
Predicted Functional Partners:
rimP
Ribosome maturation factor rimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
       0.563
nusA
Transcription elongation protein nusA; Participates in both transcription termination and antitermination.
       0.538
AEK22757.1
Ribosomal protein S30Ae/sigma 54 modulation protein (PF02482); Ribosomal protein S30Ae/sigma 54 modulation protein (TIGR00741); Ribosomal protein S30Ae/sigma 54 modulation protein (G3DSA:3.30.160.100); Ribosomal protein S30Ae/sigma 54 modulation protein (SSF69754); Protein involved in binding and primary metabolic process.
   
  
 0.520
AEK24528.1
O-6-methylguanine-DNA-alkyltransferase; AltName: Full=6-O-methylguanine-DNA methyltransferase;Short=MGMT;AltName: Full=O-6-methylguanine-DNA-alkyltransferase; Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding (PTHR10815); Methylguanine DNA methyltransferase, ribonuclease-like (PF02870); Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding (SSF46767); Methylated DNA-protein cysteine methyltransferase domain (SSF53155); Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding (PF01035); Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA bi [...]
  
    0.495
AEK24144.1
N-terminus: TMH(LipoP); AltName: Full=Cytochrome c oxidase polypeptide I homolog;AltName: Full=Cytochrome CBB3 subunit 1;AltName: Full=Heme B/copper cytochrome c oxidase subunit; 13 transmembrane domains; Cytochrome c oxidase, monohaem subunit/FixO (TIGR00781); Cytochrome c oxidase, subunit I (PS50855); Cytochrome c oxidase, subunit I (PF00115); Cytochrome c oxidase, subunit I (SSF81442); Cytochrome c oxidase, subunit I (PS00077); Cytochrome c domain (SSF46626); Cytochrome c oxidase, monohaem subunit/FixO (PF02433); Cytochrome c oxidase, subunit I (PTHR10422); Cytochrome c domain (PS51 [...]
  
  
 0.490
groL
groEL protein; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
   
 
 0.459
AEK24012.1
Short=NADP-ME; Malic enzyme, NAD-binding (PF03949); NAD(P)-binding domain (G3DSA:3.40.50.720); Malic (PIRSF036684); Aminoacid dehydrogenase-like, N-terminal domain (SSF53223); MALIC ENZYME-RELATED (PTHR23406); Undefined Gene3D domain (G3DSA:3.40.50.10380); Isocitrate/Isopropylmalate dehydrogenase-like (SSF53659); Malic enzyme, N-terminal (PF00390); Phosphate acetyl/butaryl transferase (PF01515); MALIC ENZYME (PTHR23406:SF2); NAD(P)-binding domain (SSF51735); Protein involved in catalytic activity, binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acc [...]
  
  
 0.458
AEK23644.1
Sensor protein evgS; N-terminus: TMH(LipoP); Flags: Precursor; 3 transmembrane domains; Signal transduction histidine kinase, homodimeric (SSF47384); ATPase-like, ATP-binding domain (SSF55874); TETRACYCLINE RESISTANCE ELEMENT REGULATOR RTEA - BACTEROIDES THETAIOTAOMICRON (PTHR23283:SF38); Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (SM00388); Signal transduction histidine kinase, phosphotransfer (Hpt) domain (SSF47226); Undefined Gene3D domain (G3DSA:1.10.287.240); ATPase-like, ATP-binding domain (PF02518); Signal transduction histidine kinase, [...]
     
 0.445
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
     
 0.420
gcvP
Glycine cleavage system P-protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.400
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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