STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK22459.1Hypothetical protein; Weak similarity to UniProt:P76578; N-terminus: SpII(LipoP); Undefined Gene3D domain (G3DSA:1.50.10.20); A2M (PF00207); Alpha-2-macroglobulin, thiol-ester bond-forming (PF10569); Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (SSF48239); Alpha-2-macroglobulin, N-terminal (PF01835); Alpha-2-macroglobulin MG1 domain (PF11974); Alpha-2-macroglobulin, N-terminal 2 (PF07703); Protein involved in endopeptidase inhibitor activity. (1824 aa)    
Predicted Functional Partners:
AEK23914.1
Transpeptidase-like module; N-terminus: SpII(LipoP); Short=PBP-1c;Short=PBP1c;Includes:RecName: Full=Penicillin-insensitive transglycosylase;AltName: Full=Peptidoglycan TGase;Includes:RecName: Full=Transpeptidase-like module; 1 transmembrane domain; Penicillin-binding protein, transpeptidase (PF00905); Undefined Gene3D domain (G3DSA:3.40.710.10); Penicillin-binding protein 1C (TIGR02073); Glycosyl transferase, family 51 (PF00912); Beta-lactamase-type transpeptidase fold (SSF56601); Penicillin-binding, C-terminal (PF06832); Protein involved in catalytic activity, penicillin binding, pep [...]
 
   
 0.834
AEK22481.1
Uncharacterized protein yijF; N-terminus: SpI(LipoP); Flags: Precursor; Protein of unknown function DUF1287 (PD357862); Protein of unknown function DUF1287 (PF06940).
 
     0.569
AEK22458.1
Regulatory protein pchR; Helix-turn-helix, AraC type (PF00165); Helix-turn-helix, AraC domain (PS01124); ARAC FAMILY TRANSCRIPTIONAL REGULATORY PROTEIN (PTHR11019:SF11); Helix-turn-helix, AraC domain (SM00342); Helix-turn-helix, AraC type, subdomain 2 (PS00041); Homeodomain-like (SSF46689); THIJ/PFPI (PTHR11019); Helix-turn-helix, AraC (PR00032); Protein involved in transcription factor activity, sequence-specific DNA binding and regulation of transcription, DNA-dependent.
       0.523
AEK24297.1
Conserved hypothetical protein; N-terminus: SpII(LipoP); 1 transmembrane domain.
  
     0.497
AEK23214.1
Conserved putative Metallocarboxypeptidase D; Enzymatic activity prediction (EC) from PRIAM_profiles_2090616; PROTEASE M14 CARBOXYPEPTIDASE (PTHR11532); Zn-dependent exopeptidases (SSF53187); Peptidase M14, carboxypeptidase A (PF00246); SOL1 PROTEIN (PTHR11532:SF1); Undefined Gene3D domain (G3DSA:3.40.630.10); Protein involved in metallocarboxypeptidase activity, zinc ion binding and proteolysis.
   
 0.437
AEK23683.1
Conserved hypothetical protein.
  
     0.421
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.