STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK22460.1Hypothetical protein; Weak similarity to UniProt:Q96WV6; N-terminus: SpI(LipoP). (2450 aa)    
Predicted Functional Partners:
AEK22461.1
Conserved hypothetical protein.
 
 
  
0.748
AEK22463.1
Hypothetical protein; Weak similarity to UniProt:Q7NFT5; N-terminus: SpI(LipoP); 1 transmembrane domain; TPR-like (SSF48452); WD40-like Beta Propeller (PF07676); Carboxypeptidase-like, regulatory domain (SSF49464); Outer membrane protein, OmpA/MotB, C-terminal (SSF103088); Outer membrane protein, OmpA/MotB, C-terminal (G3DSA:3.30.1330.60); Tetratricopeptide-like helical (G3DSA:1.25.40.10); Outer membrane protein, OmpA/MotB, C-terminal (PS51123); Outer membrane protein, OmpA/MotB, C-terminal (PF00691); Outer membrane protein, bacterial (PR01021); Protein involved in binding.
 
   0.693
AEK22462.1
Surface exposed; DUF3308 (PF11751); Conserved hypothetical protein CHP03519, membrane, Bacteroidetes (TIGR03519).
 
     0.546
AEK22272.1
Hypothetical protein; Weak similarity to UniProt:Q00808; N-terminus: SpII(LipoP); TolB, C-terminal domain (SSF50960); WD40-like Beta Propeller (PF07676); Undefined Gene3D domain (G3DSA:2.120.10.60); Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 (SSF51004).
  
   0.407
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.