Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEK22466.1Hypothetical protein. (64 aa)    
Predicted Functional Partners:
AEK22465.1
Hypothetical protein; Weak similarity to UniProt:P0C6R0; N-terminus: SpI(LipoP); Carboxypeptidase-like, regulatory domain (SSF49464); TonB-dependent receptor, beta-barrel (G3DSA:2.40.170.20); TonB-dependent receptor, plug (PF07715); Porins (SSF56935); Protein involved in receptor activity, transporter activity and transport.
       0.553
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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