STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK22471.1Conserved hypothetical protein; 1 transmembrane domain. (157 aa)    
Predicted Functional Partners:
AEK22469.1
Conserved hypothetical protein; N-terminus: SpI(SignalPHMM).
 
     0.922
AEK22472.1
AltName: Full=Sigma-W factor; Undefined Gene3D domain (G3DSA:1.10.1740.10); RNA polymerase sigma factor, region 2 (SSF88946); RNA polymerase sigma factor 70, region 4 type 2 (PF08281); RNA polymerase sigma factor, region 3/4 (SSF88659); RNA polymerase sigma-70 (TIGR02937); RNA polymerase sigma-70 region 2 (PF04542); Protein involved in DNA binding, transcription factor activity, sigma factor activity, transcription initiation and regulation of transcription, DNA-dependent; Belongs to the sigma-70 factor family. ECF subfamily.
       0.779
AEK22777.1
Conserved hypothetical protein; N-terminus: SpII(LipoP).
  
     0.768
AEK22437.1
Hypothetical protein; Weak similarity to UniProt:C7PG02; N-terminus: TMH(LipoP); 6 transmembrane domains.
  
     0.747
AEK22628.1
Conserved hypothetical protein; N-terminus: SpI(LipoP); 1 transmembrane domain.
  
     0.743
AEK23744.1
Putative hydrolase; N-terminus: SpI(SignalPHMM); 1 transmembrane domain.
  
     0.743
AEK22240.1
Putative esterase; N-terminus: SpI(LipoP); 1 transmembrane domain; alpha/beta-Hydrolases (SSF53474); Putative esterase (PF00756); Undefined Gene3D domain (G3DSA:3.40.50.1820).
  
     0.741
AEK24309.1
N-terminus: SpII(LipoP); AltName: Full=Rieske iron-sulfur protein;Short=RISP;Short=ISP;AltName: Full=Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein.
  
     0.731
AEK22238.1
Dihydrofolate reductase; N-terminus: TMH(LipoP); 2 transmembrane domains.
  
     0.727
AEK23601.1
Ribonuclease Z.
  
     0.724
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.