STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK22730.1Conserved hypothetical protein; N-terminus: SpI(LipoP); 1 transmembrane domain. (171 aa)    
Predicted Functional Partners:
AEK22729.1
Conserved hypothetical protein; N-terminus: SpI(LipoP).
 
     0.922
AEK24082.1
Conserved hypothetical protein.
  
     0.733
AEK23133.1
Conserved hypothetical protein; N-terminus: SpII(LipoP).
  
     0.666
AEK23200.1
Conserved hypothetical protein; N-terminus: SpI(SignalPHMM); 1 transmembrane domain.
  
     0.643
AEK23808.1
Conserved hypothetical protein; N-terminus: SpI(SignalPHMM); 1 transmembrane domain; Protein secE/sec61-gamma protein (PF00584); SecE subunit of protein translocation complex (TIGR00964); Protein involved in P-P-bond-hydrolysis-driven protein transmembrane transporter activity, protein targeting, intracellular protein transport and protein secretion; Belongs to the SecE/SEC61-gamma family.
  
     0.642
AEK22752.1
Conserved hypothetical protein.
  
     0.639
AEK23262.1
Secreted protein; N-terminus: SpI(LipoP).
  
     0.638
AEK23083.1
Secreted protein; N-terminus: SpI(SignalPHMM); Flags: Precursor; 1 transmembrane domain.
  
     0.621
AEK23082.1
Conserved hypothetical protein.
  
     0.619
AEK22731.1
23S rRNA methyltransferase/RumA (TIGR00479); RNA M5U METHYLTRANSFERASE FAMILY (PTHR11061); S-adenosyl-L-methionine-dependent methyltransferases (SSF53335); (Uracil-5)-methyltransferase (PS01231); Undefined Gene3D domain (G3DSA:3.40.50.150); RNA M5U METHYLTRANSFERASE (PTHR11061:SF2); (Uracil-5)-methyltransferase (PS01230); Nucleic acid-binding, OB-fold-like (SSF50249); Deoxyribonuclease/rho motif-related TRAM (PS50926); (Uracil-5)-methyltransferase (PF05958); Protein involved in RNA methyltransferase activity, RNA binding and RNA processing; Belongs to the class I-like SAM-binding methy [...]
       0.608
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.