STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEK22785.1UPF0312 protein; Lipid/polyisoprenoid-binding, YceI-like (PF04264); Lipid/polyisoprenoid-binding, YceI-like (G3DSA:2.40.128.110); Lipid/polyisoprenoid-binding, YceI-like (SSF101874); Belongs to the UPF0312 family. (153 aa)    
Predicted Functional Partners:
AEK22786.1
Hypothetical protein; N-terminus: SpI(SignalPHMM).
       0.555
AEK22784.1
Hypothetical protein; Weak similarity to UniProt:Q8MTI2; N-terminus: TMH(LipoP).
       0.429
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
   
    0.420
Your Current Organism:
Capnocytophaga canimorsus
NCBI taxonomy Id: 860228
Other names: C. canimorsus Cc5, Capnocytophaga canimorsus Cc5, Capnocytophaga canimorsus str. Cc5, Capnocytophaga canimorsus strain Cc5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.